Does Darrel Falk’s Junk DNA Argument for Common Descent Commit “One of the Biggest Mistakes in the History of Molecular Biology”?

Recently I was e-mailed by an individual who had read the book Coming to Peace with Science, by Darrel Falk, president of the BioLogos Foundation. This person was interested in a response to the arguments for human/ape common ancestry in Dr. Falk’s book. Not having read Dr. Falk’s book before, I wrote back that I hadn’t yet read the book but had a strong suspicion that it would argue that shared non-functional (aka “junk”) DNA between humans, apes, and other species is evidence of their common ancestry. This is an extremely common argument from theistic evolutionists–Francis Collins made it in The Language of God (and Collins wrote the foreword to Dr. Falk’s book). Of course in 2010, we’re seeing more Read More ›

Beginning to Decipher the SINE Signal

Remember the analogy of the two moons I used yesterday to discuss the distribution of SINEs in the mouse and rat genomes? Well, I am going to use it again today, but only for a moment. Moon Mysteries and the Lunarlogos FoundationSuppose you are keenly interested in the topography of one of the moons, named Y6-9. Suppose also that the books you first select to read on the topic are popular works, written by “experts” who are “living legends.” As you read through the works, you find paragraphs here and there about how utterly decrepit Y6-9 is, and how this space body exemplifies eons of random events. The authors argue that we already knew all there was to know about Read More ›

Discovering Signs in the Genome by Thinking Outside the BioLogos Box

Yesterday I promised that I would show you a mysterious genomic signal, and today I shall fulfill that promise. The previous blog was devoted to describing the linear distribution of LINEs and SINEs along mammalian chromosomal DNA. We saw that L1 retrotransposons tend to be densest in the regions where Alus and Alu-like elements are the least common and vice versa. I included the following figure from an article co-authored by Francis Collins1 that showed this compartmentalization of LINEs and SINEs along over a hundred million genetic letters of rat chromosome 10:The blue line indicates the distribution of SINEs along a 110-million base pair interval of rat chromosome 10. (From Fig. 9d of Ref. 1.) Taxon-Specific Elements: The SINEs Aren’t Read More ›

Ayala and Falk Miss the Signs in the Genome

In his recent response to Stephen Meyer’s Signature in the Cell, Francisco Ayala claimed that repetitive portions of our DNA called “Alu” sequences are “nonsensical.” Ayala wrote: “Would a function ever be found for these one million nearly identical Alu sequences? It seems most unlikely.” In his response to Ayala, Meyer showed that Ayala is factually wrong about this. According to recent technical papers in genomics, Alu sequences perform multiple functions. In a rejoinder to Meyer, Darrel Falk defended Ayala and claimed although “a number of functional regions have been discovered within Alu sequences,” there “is no question that many Alu sequences really have no function.” In my last blog, I showed that the vast majority of the genome is Read More ›

A Response to Questions from a Biology Teacher: How Do We Test Intelligent Design?

A biology educator recently wrote me asking how we test intelligent design using the scientific method, how ID is falsifiable, and how ID explains patterns we observe in nature. These are very common questions that we receive all the time from teachers, students, and interested members of the public, and they’re usually legitimate, sincere, and thoughtful questions. In this case, they certainly appeared to be such, and below I post a slightly modified version of my response to the teacher, withholding any information about the teacher to protect his/her identity: We help many educators to better understand the debate over evolution. Contact us for more information!